BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004D04LP1|AL425248
(1013 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1147 1868 0.0
>3x_Contig1147
Length = 6505
Score = 1868 bits (940), Expect = 0.0
Identities = 1000/1012 (98%), Gaps = 8/1012 (0%)
Strand = Plus / Plus
Query: 1 gatcgaaatagttaccacgttgcctcataaggactatacgtacctggtgctaaatggctg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3767 gatcgaaatagttacca-gttgcctcataaggactatacgtacctggtgctaaatggctg 3825
Query: 61 ttgtyattattattattattattgacattagcttggcattagtagcttgctttgaatgcc 120
|||| |||||||||||||||||||||||||| |||| |||||||| ||| ||||||||||
Sbjct: 3826 ttgttattattattattattattgacattag-ttgg-attagtag-ttg-tttgaatgcc 3881
Query: 121 aggaggagacattggattcacactcatatcgttagggaaccaaacattgccgacatttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3882 aggaggagacattggattcacactcatatcgttagggaaccaaacattgccgacatttgg 3941
Query: 181 gaccaacccgttgacgttagaagggccagtaatttgagatgaaacggtattgttcctagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3942 gaccaacccgttgacgttagaagggccagtaatttgagatgaaacggtattgttcctagt 4001
Query: 241 tctggaaatggtatttgatgcagttggttgaagcgggacgctgtttgtggcaaaagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4002 tctggaaatggtatttgatgcagttggttgaagcgggacgctgtttgtggcaaaagtgaa 4061
Query: 301 cgaatcaccggaaagccttggttgtgatgggaccaaaagacttgaactatccggaagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4062 cgaatcaccggaaagccttggttgtgatgggaccaaaagacttgaactatccggaagatg 4121
Query: 361 aatagcttgattgtaatctacgtcaagtggcggggtgatatgtccaggcactgacaaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4122 aatagcttgattgtaatctacgtcaagtggcggggtgatatgtccaggcactgacaaatt 4181
Query: 421 aatctgagctatagaacccgacttcgaagtctgttcactggtatttgcagtcgcatcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4182 aatctgagctatagaacccgacttcgaagtctgttcactggtatttgcagtcgcatcatc 4241
Query: 481 cgagcttaactcaccagaatggttaccttctcccacggcactactaccctttgaaccctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4242 cgagcttaactcaccagaatggttaccttctcccacggcactactaccctttgaaccctt 4301
Query: 541 cttattatgatgcaatttcgcactgatactaggtaaaagattcgatagcgtgttggagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4302 cttattatgatgcaatttcgcactgatactaggtaaaagattcgatagcgtgttggagaa 4361
Query: 601 tttccctgccttggatctataagaacctagcttctgtggctggattggtagctggtctat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4362 tttccctgccttggatctataagaacctagcttctgtggctggattggtagctggtctat 4421
Query: 661 attattgccaccacttaaggtgaaatcatcttcgtatatgggaattgtcactcctggatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4422 attattgccaccacttaaggtgaaatcatcttcgtatatgggaattgtcactcctggatc 4481
Query: 721 gataacttccggaatgttggacaatcctgacatagaatcgccggaagctttcctcttctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4482 gataacttccggaatgttggacaatcctgacatagaatcgccggaagctttcctcttctc 4541
Query: 781 cataacgtgaattggatatttgcgagaagccgggaaaaaaacctatttgctatttttgac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4542 cataacgtgaattggatatttgcgagaagccgggaaaaaaacctatttgctatttttgac 4601
Query: 841 ctgttccttggaaagttagctttagctctgattgataagttttatatctcggttttctaa 900
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 4602 ctgttccttggaaagttagcttta-ctctgattgataag-tttatatctcggttttctaa 4659
Query: 901 acacactagagtygggtcaatgaaagtwagagccaattattagataaaagtatatctttg 960
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4660 acacactagagtcgggtcaatgaaagtaagagccaattattagataaaagtatatctttg 4719
Query: 961 tcttctgaatygactacactagaatctc-cagtgaatatacccttttgacta 1011
|||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4720 tcttctgaatcgactacactagaatctcacagtgaatatacccttttgacta 4771
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6501
Number of Sequences: 1807
Number of extensions: 6501
Number of successful extensions: 255
Number of sequences better than 1.0e-20: 1
length of query: 1013
length of database: 10,358,551
effective HSP length: 16
effective length of query: 997
effective length of database: 10,329,639
effective search space: 10298650083
effective search space used: 10298650083
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)